STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME2Putative crossover junction endonuclease EME2. (451 aa)    
Predicted Functional Partners:
EME1
Crossover junction endonuclease EME1.
  
  
0.964
MUS81L
Crossover junction endonuclease MUS81.
    
 0.935
MUS81
Crossover junction endonuclease MUS81.
    
 0.935
SEPT9
Septin-9 isoform A; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 
 0.726
ERCC4
DNA repair endonuclease XPF.
    
 0.631
EXO1
Exonuclease 1.
   
 0.600
FANCM-1
Fanconi anemia group M protein isoform B.
    
 0.600
DNA2
DNA replication ATP-dependent helicase/nuclease DNA2.
    
 0.569
Y1Q_0019953
Helicase ATP-binding domain-containing protein.
    
 0.569
FAAP24
Fanconi anemia core complex-associated protein 24.
    
 0.561
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.