STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRAMP1-1Protein cramped-like isoform A. (1344 aa)    
Predicted Functional Partners:
GON4L-1
GON-4-like protein isoform B.
   
 
 0.626
NR0B2
Nuclear receptor subfamily 0 group B member 2.
    
 
 0.600
SFI1-1
SFI1-like protein isoform A.
      
 0.598
CRYM
Ketimine reductase mu-crystallin.
      
 0.576
HN1L
Hematological and neurological expressed 1-like protein.
      
 0.540
SKIV2L2
Superkiller viralicidic activity 2-like 2.
   
  
 0.539
FAM173A
Protein FAM173A.
      
 0.487
NPAT-1
Protein NPAT isoform A.
    
 
 0.444
Y1Q_0008259
Short-chain dehydrogenase/reductase family 42E member 1.
      
 0.443
TSR3
Ribosome biogenesis TSR3-like protein.
      
 0.436
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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