STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNPO2Transportin-2. (996 aa)    
Predicted Functional Partners:
RAN
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.823
ZC3H14
Zinc finger CCCH domain-containing protein 14.
    
 
 0.798
ADGRD1
Adhesion G-protein coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.
   
 0.752
IPO5
Importin-5.
   
 
0.719
NUP98
Nuclear pore complex protein Nup98-Nup96 isoform A.
   
 0.700
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit isoform A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.687
IPO4
Importin-4.
   
 
0.663
Y1Q_0017137
Importin-4-like.
   
 
 0.663
XPO1
Exportin-1.
   
 
 0.633
EXOSC8
Exosome complex component RRP43.
   
 
  0.623
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.