STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP89Centrosomal protein of isoform A. (809 aa)    
Predicted Functional Partners:
SCLT1
Sodium channel and clathrin linker 1 isoform A.
     
 0.701
CEP83
Centrosomal protein of.
     
 0.700
RAB3IP
Rab-3A-interacting protein.
     
 0.635
FBF1
Fas-binding factor 1 isoform B.
      
 0.599
CEP104
Centrosomal protein of.
      
 0.599
CEP350
Centrosome-associated protein 350 isoform A.
      
 0.596
CEP164
Centrosomal protein of isoform A.
     
 0.589
SEPT2
Septin-2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
     
 0.581
CEP76
Centrosomal protein of isoform A.
     
 0.580
ATRIP
ATR-interacting protein.
   
    0.558
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.