STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC78Coiled-coil domain-containing protein 78 isoform A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (864 aa)    
Predicted Functional Partners:
KIF11
Kinesin-like protein KIF11 isoform B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
0.642
BBOF1
Basal body-orientation factor 1.
    
 
 0.614
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.543
CCDC67-1
Deuterosome protein 1 isoform B.
      
 0.539
SUFU
Suppressor of fused homolog.
    
 0.494
MCIDAS
Multicilin.
      
 0.487
PRC1-1
Protein regulator of cytokinesis 1 isoform B.
   
 
 0.456
PRC1
Uncharacterized protein.
   
 
 0.456
KIF4A
Chromosome-associated kinesin KIF4A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
0.424
KIF21A-2
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
0.424
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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