STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR46WD repeat-containing protein 46. (640 aa)    
Predicted Functional Partners:
UTP3-1
Something about silencing protein 10 isoform A.
   
 0.999
NOC4L
Nucleolar complex 4-like protein isoform B.
   
 0.999
PDCD11
RRP5-like protein.
   
 0.999
NOP14
Nucleolar protein 14.
   
 0.999
UTP20
Small subunit processome component 20-like protein.
   
 0.998
HEATR1
HEAT repeat-containing protein 1.
   
 0.998
DCAF13
DDB1-and CUL4-associated factor 13.
   
 0.998
COPRS
Uncharacterized protein.
   
 
 0.998
WDR75
WD repeat-containing protein 75.
   
 0.998
PWP2
Periodic tryptophan 2-like protein.
   
 
 0.998
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.