STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CELSR3Cadherin EGF LAG seven-pass G-type receptor 3 isoform A; Belongs to the G-protein coupled receptor 2 family. (2750 aa)    
Predicted Functional Partners:
RYK
Tyrosine-protein kinase RYK.
   
  
 0.643
OCM
Parvalbumin, thymic CPV3; Belongs to the parvalbumin family.
     
 0.585
PITPNM1
Membrane-associated phosphatidylinositol transfer protein 1.
      
 0.584
AQP5
Aquaporin-5; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.521
SLC26A5-2
Prestin.
 
    
 0.466
EMX1
Homeobox protein EMX1.
   
  
 0.458
Y1Q_0005888
Vang-like protein.
    
 0.429
VANGL1
Vang-like protein.
    
 0.429
TAOK1
Serine/threonine-protein kinase TAO1; Belongs to the protein kinase superfamily.
      
 0.428
TAOK3
Serine/threonine-protein kinase TAO3.
      
 0.428
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.