STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPM8Uncharacterized protein. (1065 aa)    
Predicted Functional Partners:
TRPA1
Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.791
trpv4
Transient receptor potential cation channel subfamily V member 4 isoform A; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.725
TRPV4L
Transient receptor potential cation channel subfamily V member 4 isoform B; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.725
TRPV2
Transient receptor potential cation channel subfamily V member 2; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.725
TRPV2-2
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.655
TRPC1
Uncharacterized protein.
    
 0.621
RHOA
Transforming protein RhoA.
    
 0.596
ANK3
Uncharacterized protein.
     
 0.487
STIM1
Stromal interaction molecule 1 isoform A.
      
 0.475
ANK2
Ankyrin-2 isoform D.
     
 0.475
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.