STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELTSelenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily. (134 aa)    
Predicted Functional Partners:
SELO
Selenoprotein O.
      
 0.839
TXNRD1
Glutaredoxin domain-containing protein.
      
 0.746
SELENOF
Uncharacterized protein.
   
  
 0.724
EEFSEC
Selenocysteine-specific elongation factor isoform B.
   
  
 0.701
VIMP
Selenoprotein S.
      
 0.667
CEPT1
Choline/ethanolaminephosphotransferase 1 isoform B; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.629
MSRA
Mitochondrial peptide methionine sulfoxide reductase isoform C.
      
 0.628
SELM
Selenoprotein M.
      
 0.615
MSRB1
Methionine-R-sulfoxide reductase B1.
      
 0.580
TXNRD2
Thioredoxin reductase 2, mitochondrial.
      
 0.571
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.