STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0007743Ig-like domain-containing protein. (141 aa)    
Predicted Functional Partners:
Y1Q_0023210
Uncharacterized protein.
  
 0.660
Y1Q_0005960
Uncharacterized protein.
    
 0.596
Y1Q_0005958
Ig epsilon chain C region.
    
 0.596
Y1Q_0005956
Uncharacterized protein.
    
 0.596
Y1Q_0022937
Ig-like domain-containing protein.
   
 0.546
Y1Q_0018225
Ig-like domain-containing protein.
   
 0.546
Y1Q_0017201
Uncharacterized protein.
   
 0.546
CD8BL
T-cell surface glycoprotein CD8 beta chain.
   
 0.546
NT5E
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
   0.513
Y1Q_0003693
MHC_I-like_Ag-recog domain-containing protein.
  
 
  0.491
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.