STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR5A2Nuclear receptor subfamily 5 group A member 2. (539 aa)    
Predicted Functional Partners:
NR0B2
Nuclear receptor subfamily 0 group B member 2.
   
0.844
CTNNB1
Catenin beta-1 isoform B.
    
 
 0.769
PPARGC1A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform A.
    
 
 0.720
HOXB7
Homeobox protein Hox-B7.
    
 0.688
NCOA2
Nuclear receptor coactivator.
    
 0.668
NCOA3
Nuclear receptor coactivator 3 isoform B.
    
 0.668
NCOA1
Nuclear receptor coactivator 1 isoform A.
    
 0.668
Y1Q_0014200
Nuclear receptor subfamily 0 group B member 2-like.
    
0.616
NR0B1
Nuclear receptor subfamily 0 group B member 1.
    
 0.616
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform B.
    
 0.603
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.