STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEK7Serine/threonine-protein kinase Nek7 isoform B; Belongs to the protein kinase superfamily. (380 aa)    
Predicted Functional Partners:
NEK9
Serine/threonine-protein kinase Nek9.
    
0.978
NLRP3
NACHT, LRR and PYD domains-containing protein 12.
    
 0.909
THPO
Thrombopoietin.
      
 0.612
ANKS3
Ankyrin repeat and SAM domain-containing protein 3 isoform B.
    
 
 0.610
Y1Q_0002600
NACHT, LRR and PYD domains-containing protein 3-like.
    
 
 0.580
Y1Q_0006369
Uncharacterized protein.
    
 
 0.580
ANKS6
Ankyrin repeat and SAM domain-containing protein 6 isoform B.
    
 
 0.574
ARL13B
ADP-ribosylation factor-like protein 13B isoform A.
    
 
 0.564
VTN
Vitronectin.
      
 0.540
RCC1
Regulator of chromosome condensation.
    
 0.527
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.