STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRBP1Ribosome-binding protein 1. (916 aa)    
Predicted Functional Partners:
UNC79
Unc-79-like protein isoform B.
    
 0.782
SYNJ2BP-1
Synaptojanin-2-binding protein.
    
 0.596
ZWINT
ZW10 interactor.
    
   0.566
RANBP2
E3 SUMO-protein ligase RanBP2.
    
 0.563
SPCS2
Signal peptidase complex subunit 2.
   
  
 0.556
CMC2
COX assembly mitochondrial protein.
      
 0.540
KDM6B-2
Uncharacterized protein.
    
 0.526
LEMD2
LEM domain-containing protein 2.
   
 0.474
RND2
Rho-related GTP-binding protein RhoN.
   
  0.472
SRPRB
Signal recognition particle receptor subunit beta.
    
 
 0.460
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.