STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIGGGPI ethanolamine phosphate transferase 2. (882 aa)    
Predicted Functional Partners:
PIGF
Phosphatidylinositol-glycan biosynthesis class F protein.
    
 0.962
TMED10
Transmembrane emp24 domain-containing protein 10.
    
 
 0.930
GAK-2
Uncharacterized protein.
   
  
 0.727
GAK
Cyclin-G-associated kinase isoform A.
   
  
 0.719
PIGK
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 
 0.700
PIGH-1
Phosphatidylinositol N-acetylglucosaminyltransferase subunit H isoform A.
    
 
 0.697
PIGL
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase isoform B.
      
 0.696
PIGC
Phosphatidylinositol N-acetylglucosaminyltransferase subunit C.
      
 0.696
PIGV
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 
 0.637
PIGN
GPI ethanolamine phosphate transferase 1.
      
0.629
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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