STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PICK1PRKCA-binding protein isoform A. (428 aa)    
Predicted Functional Partners:
GRIA2
Uncharacterized protein.
    
 0.965
Y1Q_0015521
Uncharacterized protein.
    
 0.877
GRIP2
Glutamate receptor-interacting protein 2 isoform A.
    
 0.848
GRIA4
Glutamate receptor 4 isoform C.
    
 0.834
TSPAN7
Tetraspanin.
     
 0.803
NSF
Vesicle-fusing ATPase.
   
 
 0.788
GRIA4-2
Uncharacterized protein.
    
 0.783
Y1Q_0023752
Uncharacterized protein.
    
 0.718
GRIP2-2
Uncharacterized protein.
    
 0.718
ICA1
Islet cell autoantigen 1 isoform A.
    
 
 0.704
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.