STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0008958Methyltransf_11 domain-containing protein. (301 aa)    
Predicted Functional Partners:
TOMM22
Mitochondrial import receptor subunit TOM22-like protein.
   
 0.962
TOMM70A
Mitochondrial import receptor subunit TOM70.
   
 0.916
TOMM40L
Mitochondrial import receptor subunit TOM40B.
   
 0.796
PVRL2
Poliovirus receptor-related protein 2.
   
 0.796
TOMM40
Mitochondrial import receptor subunit TOM40-like protein.
   
 0.796
PINK1
Serine/threonine-protein kinase PINK1, mitochondrial; Belongs to the arginase family.
    
 0.735
VDAC1
Voltage-dependent anion-selective channel protein 1.
   
 0.692
VDAC2
Voltage-dependent anion-selective channel protein 2.
   
 0.692
VDAC3
Voltage-dependent anion-selective channel protein 3.
   
 0.692
RHOT2
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
   
 0.595
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.