STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNGAcetylcholine receptor subunit gamma. (352 aa)    
Predicted Functional Partners:
CHRNA1
Acetylcholine receptor subunit alpha.
  
0.694
Y1Q_0002196
Neur_chan_memb domain-containing protein.
 
      0.686
SLC6A9
Sodium-and chloride-dependent glycine transporter 1.
      
 0.590
CHRNB3
Neuronal acetylcholine receptor subunit beta-3 isoform A.
  
0.587
GLRA3
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
  
 0.575
Y1Q_0005868
Uncharacterized protein.
  
 
0.544
CHRNA2
Neuronal acetylcholine receptor subunit alpha-2.
  
 
0.541
UTRN
Uncharacterized protein; May play a role in anchoring the cytoskeleton to the plasma membrane.
      
 0.528
THY1
Thy-1 membrane glycoprotein.
      
 0.468
DMD
Uncharacterized protein.
      
 0.453
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.