STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF5Transcription initiation factor TFIID subunit 5. (655 aa)    
Predicted Functional Partners:
TAF6-1
Transcription initiation factor TFIID subunit 6 isoform A.
   
 0.958
TAF2
Transcription initiation factor TFIID subunit 2.
    
 0.957
TAF10
Transcription initiation factor TFIID subunit 10.
    
 0.957
TAF8-1
Transcription initiation factor TFIID subunit 8 isoform B; Belongs to the glycosyl hydrolase 18 family.
    
 0.957
TAF7L
Transcription initiation factor TFIID subunit 7-like.
    
 0.957
TAF9B
Transcription initiation factor TFIID subunit 9B.
    
 0.957
TAF1
Transcription initiation factor TFIID subunit.
   
 0.957
TAF11
Transcription initiation factor TFIID subunit 11.
    
 0.957
TAF13
Transcription initiation factor TFIID subunit 13.
    
 0.955
TRRAP
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.918
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.