STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD6-1T-cell differentiation antigen CD6 isoform D. (698 aa)    
Predicted Functional Partners:
ALCAM
CD166 antigen.
     
  0.900
CD2
T-cell surface antigen CD2.
   
 0.744
CD7
T-cell antigen CD7.
   
  
 0.741
CD5
T-cell surface glycoprotein CD5.
  
 
0.714
CD37
Tetraspanin.
    
 0.689
BST1-1
ADP-ribosyl cyclase 2 isoform C.
   
 
 0.671
CD4
T-cell surface glycoprotein CD4.
   
  
 0.629
CD247
T-cell surface glycoprotein CD3 zeta chain.
   
 
 0.624
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
 
 0.617
CD72-1
CD72 molecule.
    
 0.605
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.