STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NKX6-2Homeobox protein Nkx-6.2. (154 aa)    
Predicted Functional Partners:
GPATCH3
G patch domain-containing protein 3.
      
 0.454
RSPRY1
RING finger and SPRY domain-containing protein 1.
      
 0.444
EFCAB1
EF-hand calcium-binding domain-containing protein 1.
      
 0.443
EAF1
ELL-associated factor 1.
      
 0.443
NKX2-2
Homeobox protein Nkx-2.2.
   
  
0.440
CDK14
Cyclin-dependent kinase 14; Belongs to the protein kinase superfamily.
    
 
 0.428
ZNRF2
E3 ubiquitin-protein ligase ZNRF2.
      
 0.424
ARL2BP
ADP-ribosylation factor-like protein 2-binding protein.
      
 0.421
SNX20
Sorting nexin-20.
      
 0.421
GGCT
Gamma-glutamylcyclotransferase.
      
 0.414
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.