STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPH3-1Heterogeneous nuclear ribonucleoprotein H3 isoform A. (424 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.885
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 0.817
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.767
DDX17-2
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.742
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform A.
   
 0.723
KHSRP
Far upstream element-binding protein 2 isoform B.
   
 
 0.715
ASCC3
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.707
SRSF3
Serine/arginine-rich splicing factor 3.
   
 
 0.706
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D-like.
   
 0.699
SRSF1
Serine/arginine-rich splicing factor 1.
   
 0.697
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.