STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYBL2Myb-related protein B. (689 aa)    
Predicted Functional Partners:
LIN9
Lin-9-like protein isoform B.
    
 0.995
LIN52
Lin-52-like protein.
    
 0.991
LIN37
Lin-37-like protein.
   
 0.989
CCNA2
Cyclin-A2; Belongs to the cyclin family.
  
 0.971
LIN54
Lin-54-like protein isoform B.
    
 0.968
RBBP4-2
WD_REPEATS_REGION domain-containing protein.
   
 0.964
CCNA1-1
Cyclin-A1 isoform C; Belongs to the cyclin family.
  
 0.962
CDK2
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.929
FOXM1
Forkhead box protein M1.
   
 0.872
E2F1
Transcription factor E2F1.
   
 0.713
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.