STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLTPPhospholipid transfer protein. (487 aa)    
Predicted Functional Partners:
GDAP1
Ganglioside-induced differentiation-associated protein 1; Belongs to the GST superfamily.
      
 0.822
UNC5C
Netrin receptor UNC5C isoform B.
      
 0.778
TXNIP
Thioredoxin-interacting protein.
   
  
 0.720
APOB
Apolipoprotein B-100.
     
 0.613
PRDX5
Peroxiredoxin-5, mitochondrial.
      
 0.560
LIPC
Hepatic triacylglycerol lipase.
      
 0.538
APOF
Apolipoprotein F.
     
 0.514
TXN
Thioredoxin; Belongs to the thioredoxin family.
      
 0.493
UNC5D
Uncharacterized protein.
      
 0.489
Y1Q_0008175
Vitellogenin-like.
     
 0.482
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.