STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP57Centrosomal protein of isoform B. (543 aa)    
Predicted Functional Partners:
ACP7
Purple acid phosphatase.
      
 0.716
TMLHE
Trimethyllysine dioxygenase, mitochondrial.
      
 0.716
PLK1
Serine/threonine-protein kinase PLK.
     
 0.637
TRIP13
Pachytene checkpoint 2-like protein; Belongs to the AAA ATPase family.
   
  
 0.615
CEP63-1
Centrosomal protein of isoform A.
    
 
 0.607
BORA
Protein aurora borealis.
   
 
  0.606
GNLY
Granulysin.
      
 0.593
GPC2
Glypican-5-like; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
      
 0.592
Y1Q_0013254
Glypican-5-like; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
      
 0.592
PLK4
Serine/threonine-protein kinase PLK4.
     
 0.575
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.