STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCRS1Microspherule protein 1. (491 aa)    
Predicted Functional Partners:
NFRKB
Nuclear factor related to kappa-B-binding protein isoform B.
    
 0.947
PHF20
PHD finger protein 20.
   
 0.945
KANSL3
KAT8 regulatory NSL complex subunit 3 isoform B.
   
 0.942
INO80C-1
INO80 complex subunit C isoform A.
   
 0.940
KANSL2
KAT8 regulatory NSL complex subunit 2.
  
 0.937
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.917
KANSL1
KAT8 regulatory NSL complex subunit 1 isoform A.
    
 0.908
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.902
INO80
DNA helicase INO80.
   
 0.893
TEX30
Testis-expressed sequence 30 protein.
   
 0.891
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.