STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0020709Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family. (229 aa)    
Predicted Functional Partners:
Y1Q_0017145
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
 
     0.951
GANAB
Uncharacterized protein.
 
      0.899
GNPTG
N-acetylglucosamine-1-phosphotransferase subunit gamma.
   
 0.833
PRKCSH
Glucosidase 2 subunit beta.
   
 0.833
CLGN
Calmegin.
    
 0.641
CLGN-2
Uncharacterized protein.
    
 0.641
DNAJC10
DnaJ-like protein subfamily C member 10.
   
 0.605
SEC63
Translocation SEC63-like protein.
    
 
 0.599
MOGS
Mannosyl-oligosaccharide glucosidase.
   
 0.553
PDIA4
Protein disulfide-isomerase.
   
 0.550
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.