STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA3-2Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1085 aa)    
Predicted Functional Partners:
THBS2
Thrombospondin-2.
   
 0.968
THBS2-2
Uncharacterized protein.
   
 0.950
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.945
RELN
Reelin.
    
 0.917
FN1
Fibronectin isoform A.
     
 0.914
Y1Q_0007694
TSP C-terminal domain-containing protein.
   
 0.909
COMP
Uncharacterized protein.
   
 0.909
THBS4
Uncharacterized protein.
   
 0.909
ITGB4
Integrin beta.
   
 0.893
LAMA1
Laminin subunit alpha-1.
    
 0.882
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.