STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAT8L-2N-acetylaspartate synthetase. (127 aa)    
Predicted Functional Partners:
NAT8L-1
N-acetylaspartate synthetase.
 
      0.900
NAA35
N-alpha-acetyltransferase 35, NatC auxiliary subunit.
   
 0.838
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.710
Y1Q_0003409
Sperm acrosome membrane-associated protein 6-like.
    
 0.474
SNRPB
Small nuclear ribonucleoprotein-associated protein.
    
 0.474
NAA38
N(Alpha)-acetyltransferase 38, NatC auxiliary subunit.
    
 0.474
NAT9
N-acetyltransferase 9.
      
 0.410
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.