STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASL11BRas-like protein family member 11B isoform A. (245 aa)    
Predicted Functional Partners:
ITSN1
Intersectin-1.
    
 0.849
ITSN1-2
Uncharacterized protein.
    
 0.763
CNKSR1
Connector enhancer of kinase suppressor of ras 1.
    
 0.681
SYDE1
Rho GTPase-activating protein SYDE1.
    
 0.661
MET
Hepatocyte growth factor receptor.
   
 0.609
MET-2
Uncharacterized protein.
   
 0.609
RASSF1
Ras association domain-containing protein 1.
    
 
 0.593
GTPBP4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
  
 0.574
ARRDC2
Arrestin domain-containing protein 2.
      
 0.570
MYO9B
Unconventional myosin-IXb isoform B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.534
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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