STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNGA2Cyclic nucleotide-gated olfactory channel. (1430 aa)    
Predicted Functional Partners:
TWIST2
Twist-related protein 2.
      
 0.666
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.641
RSRC1
Serine/Arginine-related protein 53.
    
 
 0.608
FKBP3
Peptidylprolyl isomerase.
   
 
 0.592
FKBP1B
Peptidylprolyl isomerase.
   
 
 0.592
RPL23A
60S ribosomal protein L23a.
    
 
 0.573
RPS19
40S ribosomal protein S19.
    
   0.571
RPS13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
   0.571
RPS2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
   0.571
PRDM2
PR domain zinc finger protein 2.
      
 0.570
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.