STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCKARCholecystokinin receptor type A; Belongs to the G-protein coupled receptor 1 family. (429 aa)    
Predicted Functional Partners:
CCK
Cholecystokinin.
   
 0.997
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.897
Y1Q_0012624
Uncharacterized protein.
    
 0.897
GNA11-2
Uncharacterized protein.
    
 0.897
GNA15
Guanine nucleotide-binding protein subunit alpha-15.
    
 0.788
NTS
Neurotensin/neuromedin N.
    
 0.713
ADCY1
Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
     
 0.708
UTS2B
Urotensin-2B.
     
 0.657
EDN3
Endothelin-3.
    
 0.652
EDN1
Endothelin-1.
    
  0.640
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.