STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCH1E3 ubiquitin-protein ligase MARCH1. (287 aa)    
Predicted Functional Partners:
CNOT2
CCR4-NOT transcription complex subunit 2 isoform A.
    
 
 0.578
CD86
T-lymphocyte activation antigen CD86.
   
 
 0.570
SMARCD3
SWIB domain-containing protein.
      
 0.459
FAM132A
Adipolin.
    
 
 0.439
OCSTAMP
Osteoclast stimulatory transmembrane protein.
      
 0.416
FAF1
FAS-associated factor 1.
    
 
 0.411
FAF2
FAS-associated factor 2.
    
 
 0.411
ANP32B
Acidic leucine-rich nuclear phosphoprotein 32 family member E.
      
 0.410
BTBD9
BTB/POZ domain-containing protein 9.
      
 0.402
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.