STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC252',3'-cyclic-nucleotide 3'-phosphodiesterase. (1005 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1.
    
 0.860
ARMC4
Armadillo repeat-containing protein 4.
  
 
 0.851
CCDC151
Coiled-coil domain-containing protein 151.
   
 0.795
EFCAB1
EF-hand calcium-binding domain-containing protein 1.
   
 0.781
TEKT1
Tektin-1.
   
 
 0.724
CCDC114
Coiled-coil domain-containing protein 114.
   
 
 0.708
CCDC63
Coiled-coil domain-containing protein 63.
   
 
 0.708
ARMC3
Armadillo repeat-containing protein 3 isoform B.
   
 
 0.685
TEKT4
Tektin-4.
   
 
 0.650
TEKT3
Tektin-3 isoform B.
   
 
 0.642
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.