STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLXDC2Plexin domain-containing protein 2. (513 aa)    
Predicted Functional Partners:
GPR6
G-protein coupled receptor 6; Belongs to the G-protein coupled receptor 1 family.
      
 0.584
PTPRM
Receptor-type tyrosine-protein phosphatase mu isoform C.
      
 0.573
ENC1
Ectoderm-neural cortex protein 1.
      
 0.555
Y1Q_0014409
Sickle tail protein-like protein.
      
 0.540
CHN2-2
Uncharacterized protein.
      
 0.530
PDZRN3-2
Uncharacterized protein.
    
 
 0.498
PDZRN3
E3 ubiquitin-protein ligase PDZRN3.
    
 
 0.498
GFRA2
GDNF family receptor alpha; Belongs to the GDNFR family.
      
 0.480
AGTRAP
Type-1 angiotensin II receptor-associated protein.
      
 0.477
PLXND1-2
Sema domain-containing protein.
      
 0.468
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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