STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP8B1Cytochrome P450, family 8, subfamily B; Belongs to the cytochrome P450 family. (497 aa)    
Predicted Functional Partners:
HSD3B7
3 beta-hydroxysteroid dehydrogenase type 7.
   
 0.949
Y1Q_0016307
3Beta_HSD domain-containing protein.
   
 0.949
Y1Q_0018126
Sterol 26-hydroxylase, mitochondrial-like.
     
 0.907
AKR1D1
3-oxo-5-beta-steroid 4-dehydrogenase.
     
 0.904
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.795
Y1Q_0010858
Methylsterol monooxygenase 1-like; Belongs to the sterol desaturase family.
   
 0.730
FAXDC2
Fatty acid hydroxylase domain-containing protein 2; Belongs to the sterol desaturase family.
   
 0.730
MSMO1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.730
CUNH14orf1
Putative ergosterol biosynthetic protein 28.
   
 
 0.697
CYP20A1
Cytochrome P450 20A1.
   
  
 0.695
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.