STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0002200Cytochrome P450 2J6-like. (891 aa)    
Predicted Functional Partners:
Y1Q_0003462
Uncharacterized protein.
  
 0.530
Y1Q_0003460
Uncharacterized protein.
  
 0.517
AASDH
Acyl-CoA synthetase family member 4 isoform A.
  
 0.505
CYP7A1
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
  
 0.500
WRN
Werner syndrome ATP-dependent helicase.
    
 0.496
P2RY10
Putative P2Y purinoceptor 10.
      
 0.465
DSCR6
Protein ripply3.
      
 0.463
SPTLC3
Serine palmitoyltransferase 3 isoform A.
  
  
 0.451
SPTLC3-2
Aminotran_1_2 domain-containing protein.
  
  
 0.451
Y1Q_0003463
Uncharacterized protein.
  
 0.444
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.