STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC7A13Solute carrier family 7 member 13. (273 aa)    
Predicted Functional Partners:
SLC3A1
Neutral and basic amino acid transport protein rBAT.
   
 0.895
SLC3A2L
4F2 cell-surface antigen heavy chain.
   
 0.707
SLC3A2
4F2 cell-surface antigen heavy chain.
   
 0.707
SLC7A1
AA_permease_C domain-containing protein.
  
 
 0.528
SLC7A14
Putative cationic amino acid transporter.
  
 
 0.521
SLC7A3
AA_permease_C domain-containing protein.
  
 
0.521
SLC7A2-2
AA_permease_C domain-containing protein.
  
 
 0.520
SLC7A4
Cationic amino acid transporter 4.
  
 
 0.519
SLC7A2
Cationic amino acid transporter 2.
  
 
 0.517
SLC9C2
Sodium/hydrogen exchanger 11.
    
 
 0.512
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.