STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRCC1Leucine-rich repeat and coiled-coil domain-containing protein 1 isoform B. (1041 aa)    
Predicted Functional Partners:
Y1Q_0002127
SUEL-type lectin domain-containing protein.
    
 
 0.595
ADGRL3
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.595
ADGRL2
Adhesion G protein-coupled receptor L2 isoform E; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.595
ADGRL1
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.595
NSMCE2
E3 SUMO-protein ligase NSE2.
   
  
 0.554
BTBD17
BTB/POZ domain-containing protein 17.
     
 0.545
MRAS
Ras-related protein M-Ras.
    
 0.516
NME8
Thioredoxin domain-containing protein 3 isoform B.
    
 0.495
CEP83
Centrosomal protein of.
   
 0.467
PPP1R11
Protein phosphatase 1 regulatory subunit 11.
   
 
 0.420
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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