STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAMK4Calcium/calmodulin-dependent protein kinase type IV; Belongs to the protein kinase superfamily. (396 aa)    
Predicted Functional Partners:
DCX
Neuronal migration protein doublecortin.
 
  
 
 0.920
Y1Q_0005844
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
  
 
0.901
CALML6
Calmodulin-like protein 6.
   
 0.852
CALM1
Calmodulin; Belongs to the calmodulin family.
   
 0.836
Y1Q_0023495
Calmodulin-alpha-like; Belongs to the calmodulin family.
   
 0.836
CALM3
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.836
MPP1
Erythrocyte membrane protein; Belongs to the MAGUK family.
 
 
  0.778
CREB1
Cyclic AMP-responsive element-binding protein 1.
    
 0.773
CALML4
Calmodulin-like protein 4.
   
 0.728
PPP2CA
Serine/threonine-protein phosphatase; Belongs to the SKP1 family.
   
 
 0.587
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
Server load: low (20%) [HD]