STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0004190Aminopeptidase. (809 aa)    
Predicted Functional Partners:
AGT
Angiotensinogen; Belongs to the serpin family.
  
 0.762
Y1Q_0012985
Cysteine-rich venom protein TEL1-like; Belongs to the CRISP family.
   
 
 0.484
Y1Q_0012984
Serotriflin-like; Belongs to the CRISP family.
   
 
 0.484
CRISP2
Serotriflin; Belongs to the CRISP family.
   
 
 0.483
CSE1L
Exportin-2.
    
 
 0.480
HYAL1
Hyaluronidase.
     
 0.476
HYAL3-1
Hyaluronidase.
     
 0.476
HYAL6
Hyaluronidase.
     
 0.476
HYAL4
Hyaluronidase.
     
 0.476
SPAM1-1
Hyaluronidase.
     
 0.476
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.