STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC44A2Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family. (731 aa)    
Predicted Functional Partners:
NCL
Nucleolin.
      
 0.584
MUT
Methylmalonyl-CoA mutase, mitochondrial.
      
 0.558
CUNH14orf79
Clathrin_bdg domain-containing protein.
   
    0.538
TTC6
Tetratricopeptide repeat protein 6 isoform C.
   
    0.538
ACE
Angiotensin-converting enzyme.
      
 0.507
CAMK1
Protein kinase domain-containing protein.
   
  
 0.496
PRMT5
Protein arginine N-methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
      
 0.487
ASCC3
Activating signal cointegrator 1 complex subunit 3.
      
 0.481
GRK5
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
      
 0.481
GRK5-2
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
      
 0.481
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.