STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRA2Ankyrin repeat family A member 2. (313 aa)    
Predicted Functional Partners:
LRP4
LDL receptor related protein 4.
    
 0.812
LRP2
LDL receptor related protein 2.
    
 0.812
RFX5
Regulatory factor X5.
    
 0.724
RFX7
Regulatory factor X7.
   
 0.668
RFX6
Regulatory factor X6.
    
 0.658
RFX3
Regulatory factor X3.
    
 0.658
RFX2
Regulatory factor X2.
    
 0.658
RFX8
RFX family member 8, lacking RFX DNA binding domain.
    
 0.658
RFX4
Regulatory factor X4.
    
 0.658
HDAC7
Histone deacetylase 7.
   
 0.610
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.