STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA5BSemaphorin 5B. (1092 aa)    
Predicted Functional Partners:
PLXNB2
Plexin B2.
    
0.795
PLXNB1
Plexin B1.
    
0.795
NRP1
Neuropilin 1.
    
 0.768
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.766
MST1R
Macrophage stimulating 1 receptor.
    
 0.766
PLXNA1
Plexin A1.
    
 0.683
PLXNC1
Plexin C1.
    
 0.678
PLXNA2
Plexin A2.
    
 0.661
PLXNA4
Plexin A4.
    
0.661
PLXND1
Plexin D1.
    
0.661
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.