STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2TUbiquitin conjugating enzyme E2 T. (198 aa)    
Predicted Functional Partners:
LOC109318744
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.999
FANCL
FA complementation group L.
    
 0.996
FANCI
FA complementation group I.
   
 0.989
FANCB
FA complementation group B.
    
 0.988
FANCA
FA complementation group A.
   
 0.988
FANCG
FA complementation group G.
   
 0.987
FANCC
FA complementation group C.
    
 0.981
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.970
RPS27A
Ribosomal protein S27a.
    
 0.968
FAAP100
FA core complex associated protein 100.
    
 0.967
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.