Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBE2TUbiquitin conjugating enzyme E2 T. (198 aa)    
Predicted Functional Partners:
FANCL
FA complementation group L.
   
 0.999
FANCI
FA complementation group I.
   
 0.998
FANCA
FA complementation group A.
   
 0.994
FANCC
FA complementation group C.
    
 0.994
FANCG
FA complementation group G.
   
 0.994
FANCB
FA complementation group B.
    
 0.993
FAAP24
FA core complex associated protein 24.
     
 0.983
FANCM
FA complementation group M.
    
 0.983
FAAP100
FA core complex associated protein 100.
    
 0.974
FANCE
FA complementation group E.
   
 0.966
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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