STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KANK4KN motif and ankyrin repeat domains 4. (961 aa)    
Predicted Functional Partners:
REL
REL proto-oncogene, NF-kB subunit.
   
 0.658
KIF4A
Kinesin family member 4A.
    
 
 0.643
KIF21A
Kinesin family member 21A.
    
 
 0.643
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.580
TRIM33
Tripartite motif containing 33.
    
 0.572
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.554
WDR90
WD repeat domain 90.
    
  0.536
IFT81
Intraflagellar transport 81.
    
 0.535
UBXN7
UBX domain protein 7.
    
 0.526
AGBL1
ATP/GTP binding protein like 1.
    
 
 0.526
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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