STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTPAPMitochondrial poly(A) polymerase. (577 aa)    
Predicted Functional Partners:
BICC1
BicC family RNA binding protein 1.
   
 
 0.647
CALCOCO2
Calcium binding and coiled-coil domain 2.
    
   0.619
EIF4A3
Eukaryotic translation initiation factor 4A3.
    
 0.580
ATR
ATR serine/threonine kinase.
    
  0.576
GRSF1
G-rich RNA sequence binding factor 1.
    
 0.548
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
    
 
 0.537
PAPOLG
poly(A) polymerase gamma.
      
 0.536
EIF4A2
Eukaryotic translation initiation factor 4A2.
    
 0.534
SUPV3L1
Suv3 like RNA helicase.
   
  
 0.526
HELZ2
Helicase with zinc finger 2.
    
 
 0.526
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.