STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATRXATRX chromatin remodeler. (2439 aa)    
Predicted Functional Partners:
RAD51
RAD51 recombinase.
   
 
 0.915
FANCM
FA complementation group M.
   
 0.838
BCLAF1
BCL2 associated transcription factor 1.
   
 0.836
THOC2
THO complex 2.
   
 
 0.830
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.801
WRN
WRN RecQ like helicase.
   
 
 0.783
ARID4B
AT-rich interaction domain 4B.
   
 0.772
ARID4A
AT-rich interaction domain 4A.
   
 0.772
RSF1
Remodeling and spacing factor 1.
   
  0.763
RUVBL1
RuvB like AAA ATPase 1.
    
 0.754
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.