STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM4PDZ and LIM domain 4. (314 aa)    
Predicted Functional Partners:
PTK2B
Protein tyrosine kinase 2 beta.
    
 0.814
PTK2
Protein tyrosine kinase 2.
    
 0.814
GIT2
GIT ArfGAP 2.
    
 0.800
GIT1
GIT ArfGAP 1.
    
 0.800
ILK
Integrin linked kinase.
   
 0.758
TLN2
Talin 2.
    
 0.694
TLNRD1
Talin rod domain containing 1.
    
 0.694
PARVG
Parvin gamma.
   
 0.685
PARVB
Parvin beta.
   
 0.685
PARVA
Parvin alpha.
   
 0.685
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.