STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDE1nudE neurodevelopment protein 1. (346 aa)    
Predicted Functional Partners:
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 
 0.923
DISC1
DISC1 scaffold protein.
    
 
 0.850
TBC1D31
TBC1 domain family member 31.
    
 
 0.825
NUDC
Nuclear distribution C, dynein complex regulator.
     
 0.788
NDEL1
nudE neurodevelopment protein 1 like 1.
  
 
 
0.774
HAUS6
HAUS augmin like complex subunit 6.
     
 0.721
CDK1
Cyclin dependent kinase 1.
    
 0.721
NUDCD2
NudC domain containing 2.
     
 0.694
PLK1
Polo like kinase 1.
     
 0.665
BUB3
BUB3 mitotic checkpoint protein.
     
 0.659
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.