STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDGA1MAM domain containing glycosylphosphatidylinositol anchor 1. (948 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive).
    
0.690
NLGN3
Neuroligin 3.
    
 
 0.639
NLGN4X
Neuroligin 4 X-linked.
    
 
 0.639
ENSCPRP00005013554
annotation not available
    
 
 0.639
NLGN1
Neuroligin 1.
    
 
 0.639
ENSCPRP00005003975
annotation not available
    
  0.558
HGFAC
HGF activator.
    
  0.558
HABP2
Hyaluronan binding protein 2.
    
  0.558
SHH
Sonic hedgehog signaling molecule.
    
 0.534
CD47
CD47 molecule.
    
  0.530
Your Current Organism:
Crocodylus porosus
NCBI taxonomy Id: 8502
Other names: Australian saltwater crocodile, C. porosus, ZMB 278, estuarine crocodile
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.